FastQCFastQC Report
Wed 18 Jan 2023
DrosEu-179_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-179_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37182261
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA10200022.7432489917705647No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT7911552.127775392679859No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA3856881.0372903358405234No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA3451120.9281630291390832No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT3076550.82742413109305No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT2770900.7452209536154888No Hit
GAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATA963870.2592284530518464No Hit
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT861760.23176643292348464No Hit
GACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAA861470.2316884387423347No Hit
ATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCT778580.20939555020605122No Hit
ACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATA710510.1910884332719842No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA672930.18098146317675518No Hit
ATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTT578690.15563604375753265No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA414240.11140796413644667No Hit
TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT399430.10742488198875265No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)