FastQCFastQC Report
Wed 18 Jan 2023
DrosEu-179_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-179_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37182261
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT9183722.469919728657706No Hit
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA9003842.421541820708536No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT3903041.0497048579159831No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT3234060.8697857292755813No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA3103210.8345942168498037No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA3057240.82223079441027No Hit
ATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCT1033940.2780734608903961No Hit
GAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATA942370.25344612582865794No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA845440.22737724314290625No Hit
GACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAA765890.2059826324171088No Hit
ATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTT731480.1967282194054848No Hit
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT695940.18716989803282807No Hit
ACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATA641970.17265491197536373No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA500280.13454803084729033No Hit
GTCTAGTCTTGTCTAGTCTTGTCTAGTCTTGTCTAGTCTTGTCTAGTCTT387610.10424594674326018No Hit
TGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCT385170.10358971983979133No Hit
GTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGT383370.10310561802575695No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)