FastQCFastQC Report
Wed 18 Jan 2023
DrosEu-219_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-219_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38669228
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT2752500.7118062972449307No Hit
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA2607000.6741794793524195No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA1678050.4339497028489941No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT1439040.37214086611710995No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT997530.25796480860698845No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA916070.23689896265837013No Hit
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT404860.104698237058159No Hit
GAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATA393420.10173981233863785No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)