FastQCFastQC Report
Wed 18 Jan 2023
DrosEu-219_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-219_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38669228
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA2917610.7545043309372507No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT2274040.5880748382150273No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT1616860.4181257510493874No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA1324670.34256437702868026No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA1023010.26455402730046745No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT812840.21020331722164196No Hit
ATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCT426730.11035389690220866No Hit
GAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATA401250.1037646782087297No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA387070.10009767973645609No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)