FastQCFastQC Report
Wed 18 Jan 2023
DrosEu-68_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-68_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40053447
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT3564510.8899383865763164No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA3113240.7772714293478911No Hit
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA2184240.5453313418942445No Hit
TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT2137530.5336694242570433No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA2081970.5197979589621837No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT1935790.4833017243185087No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT1235010.30834050312823263No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA1210540.3022311662714073No Hit
ATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCT786330.19632018188097516No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA770080.19226310284855133No Hit
GAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATA729100.18203177369478338No Hit
ATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTT705870.17623202317643222No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT677180.16906909410318666No Hit
ACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATA626030.15629865764112638No Hit
CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT530210.1323756230019354No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)