FastQCFastQC Report
Wed 18 Jan 2023
DrosEu-68_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-68_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40053447
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA3763370.9395870472771045No Hit
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT2937920.7334999157500726No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA2504890.6253868736940419No Hit
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA2221140.5545440321278715No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT1953760.48778822956236456No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA1258960.3143200134560204No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT1179920.2945863810423108No Hit
TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT1105280.27595128079738057No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA791490.197608460515271No Hit
GAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATA764900.1909698308862156No Hit
ATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCT714150.17829926098495344No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT688010.17177298123679594No Hit
ACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATA655930.16376368306078626No Hit
ATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTT633890.15826103556080953No Hit
AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGA449580.11224502100905323No Hit
CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT438360.10944376397866581No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)