FastQCFastQC Report
Wed 21 Dec 2022
DrosEu-143_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-143_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39715499
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA6390041.6089537235828262No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT6120601.5411111918800264No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA2136230.5378832077622895No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT2000870.5038007957548261No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT1621820.40835946691743696No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA1529460.3851040622705005No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA1175120.2958844858023816No Hit
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT1142080.28756531549559533No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA704550.17739925664788952No Hit
GTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGT458450.11543352382403656No Hit
GACAAAGACAAAGACAAAGACAAAGACAAAGACAAAGACAAAGACAAAGA406660.10239327472632284No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)