FastQCFastQC Report
Thu 19 Jan 2023
TR_Ank_Yes_1_2020-09-16.trimmed2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameTR_Ank_Yes_1_2020-09-16.trimmed2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32226111
Sequences flagged as poor quality0
Sequence length75-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT1638570.508460359985727No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA1505370.4671274172673209No Hit
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA1502270.4661654643962469No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT1359260.4217884063019581No Hit
TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT1107340.34361577169519464No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA1027920.3189711597530338No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT1024240.3178292286028556No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA1006970.3124702201888401No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA533600.16558001677583745No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT487700.15133690813638667No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)