FastQCFastQC Report
Thu 19 Jan 2023
TR_Ank_Yes_1_2020-09-16.trimmed1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameTR_Ank_Yes_1_2020-09-16.trimmed1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32226111
Sequences flagged as poor quality0
Sequence length75-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA1849030.57376765071032No Hit
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA1573770.4883524419065024No Hit
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT1402230.43512231432455506No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT1331540.4131866857902898No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA1248640.3874622041735039No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA1045570.3244480849706004No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT1005270.3119426976466382No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA559830.1737193792946347No Hit
TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT554870.1721802547009163No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT482220.14963642370623No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)