FastQCFastQC Report
Thu 19 Jan 2023
DrosEu-40_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-40_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32267885
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT1649230.511105701535753No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA1522470.47182206085090483No Hit
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA1507300.46712079208166263No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT1365440.4231575760233433No Hit
TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT1118850.3467379408349819No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA1034320.32054161591315944No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT1031270.31959640366884906No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA1024490.31749524333559515No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA535450.16593898236590346No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT489580.1517236100227827No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)