FastQCFastQC Report
Thu 19 Jan 2023
DrosEu-217_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-217_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39039517
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA3269080.8373771632471785No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT3142000.8048255310125891No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT1758830.45052555337710765No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA1432470.36692820764150336No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT1202380.3079904907635No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA1153920.2955774273539296No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA932380.23882979904695031No Hit
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT776560.19891639540519931No Hit
GTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGT568830.14570620840416648No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA543900.13932037120233837No Hit
GACAAAGACAAAGACAAAGACAAAGACAAAGACAAAGACAAAGACAAAGA477420.12229147199746349No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)