FastQCFastQC Report
Thu 19 Jan 2023
DrosEu-9_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-9_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37102354
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA1729950.4662642160117388No Hit
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT1322940.35656497698232303No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA1163720.31365125781507014No Hit
GAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACA715780.19292037373154275No Hit
GTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCT677260.18253828315044376No Hit
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA559020.15066968527118252No Hit
TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT542760.1462872140134289No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT479890.12934219753280343No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA444570.11982258592002006No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT415830.11207644668583562No Hit
GAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATA409340.11032723152822055No Hit
ATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCT387320.10439229812749887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)