FastQCFastQC Report
Thu 22 Dec 2022
DrosEu-237_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-237_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35054125
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA1770440.5050589623903036No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT1583220.4516501267682477No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT1275900.3639799880898468No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA1014100.28929548234337615No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA607660.17334907090107085No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT551960.15745935749359027No Hit
ATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCT421590.12026829937988753No Hit
GTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGT376140.1073026355671408No Hit
GAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATA374260.10676632208049695No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA357460.10197373347644535No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)