FastQCFastQC Report
Wed 21 Dec 2022
DrosEu-106_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDrosEu-106_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33680723
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAACACAACACAACACAACACAACACAACACAACACAACACAACACA1624370.48228477755658633No Hit
GTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT1346690.39983999155837596No Hit
AGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACA902460.2679455544941835No Hit
GTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTTGTCTT884720.2626784466592359No Hit
CAACACAACACAACACAACACAACACAACACAACACAACACAACACAACA573740.17034669950523332No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA546180.16216397729941842No Hit
GTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGT485010.14400225315828286No Hit
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT391110.11612280413339107No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA342550.10170506137887834No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)