Basic Statistics
Measure | Value |
---|---|
Filename | US_Vir_Cha_1_2014-10-14.trimmed1.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 71199762 |
Sequences flagged as poor quality | 0 |
Sequence length | 75-151 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAG | 93081 | 0.13073217857104635 | No Hit |
AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGA | 85558 | 0.12016613201600308 | No Hit |
AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG | 83294 | 0.11698634610604457 | No Hit |
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA | 75105 | 0.105484903165828 | No Hit |