FastQCFastQC Report
Fri 20 Jan 2023
SRR1525769_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1525769_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73758455
Sequences flagged as poor quality0
Sequence length101
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN8182871.109414507123285No Hit
ATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCTATGTTATTCT906020.12283608706283233No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)