Basic Statistics
Measure | Value |
---|---|
Filename | US_Cal_Sto_1_2012-11-15.trimmed1.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 38664481 |
Sequences flagged as poor quality | 0 |
Sequence length | 75-125 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATAGAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAAC | 48943 | 0.1265838794008382 | No Hit |
AGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAG | 45399 | 0.11741784404140844 | No Hit |
ATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATAGA | 40622 | 0.10506283531906196 | No Hit |
AGAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAACAT | 38900 | 0.10060913529396658 | No Hit |