Basic Statistics
Measure | Value |
---|---|
Filename | US_Cal_Sto_1_2012-10-01.trimmed1.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 53863168 |
Sequences flagged as poor quality | 0 |
Sequence length | 75-92 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATAGAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAAC | 62859 | 0.11670126792393644 | No Hit |
AGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAG | 59157 | 0.1098282967685822 | No Hit |
AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG | 58964 | 0.10946998141661479 | No Hit |