Basic Statistics
Measure | Value |
---|---|
Filename | US_Cal_Esp_1_2013-05-07.trimmed1.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 59392949 |
Sequences flagged as poor quality | 0 |
Sequence length | 75-92 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCT | 87829 | 0.14787782300555574 | No Hit |
AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGA | 67792 | 0.11414149514616626 | No Hit |
AGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAG | 66168 | 0.11140716383690595 | No Hit |