Basic Statistics
Measure | Value |
---|---|
Filename | US_Cal_Esp_1_2012-11-20.trimmed2.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 35947791 |
Sequences flagged as poor quality | 0 |
Sequence length | 75-125 |
%GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATAGAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAAC | 44197 | 0.12294774941803796 | No Hit |
AGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAG | 41991 | 0.11681107192372404 | No Hit |
ATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATAGA | 37169 | 0.10339717397377769 | No Hit |