FastQCFastQC Report
Fri 20 Jan 2023
SRR5647775_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5647775_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31178529
Sequences flagged as poor quality0
Sequence length35-151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA405210.12996443802720778No Hit
AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG360180.1155218066894689No Hit
AGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAG354840.11380908958212878No Hit
GAATAACATAGAATAACATAGAATAACATAGAATAACATAGAATAACATA334250.10720518597910761No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA322860.1035520309505301No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)