FastQCFastQC Report
Fri 20 Jan 2023
SRR5647769_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5647769_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37490904
Sequences flagged as poor quality0
Sequence length35-151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAG417510.1113630122122422No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA392000.10455869509041447No Hit
AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGA376000.10029099324998939No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)