FastQCFastQC Report
Fri 20 Jan 2023
SRR8494462_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8494462_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53486129
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG1495540.2796126823835017Illumina Single End PCR Primer 1 (100% over 50bp)
TCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTC697300.13037024982682893No Hit
TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC554540.10367921746589663No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)