FastQCFastQC Report
Fri 13 Jan 2023
US_Lou_Wes_1_2013-09-15.trimmed2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameUS_Lou_Wes_1_2013-09-15.trimmed2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3492447
Sequences flagged as poor quality0
Sequence length75-76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG123340.35316212386329704No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTT96130.2752511348060543No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)