Read 1: /scratch/yey2sn/DEST_plus/Raw_dat_sra/SRR8449054/SRR8449054_1.fastq.gz Read 2: /scratch/yey2sn/DEST_plus/Raw_dat_sra/SRR8449054/SRR8449054_2.fastq.gz Sample name: AU_Vic_Ham_9_2014-05-16 Output directory: ./pipeline_output_destplus Number of cores used: 7 Max cov: 0.95 Min cov 4 base-quality-threshold 25 illumina-quality-coding 1.8 min-indel 5 Maxsnape 0.9 theta: 0.005 D: 0.01 priortype: informative